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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124603778_124607352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124603778 - 124607352

Intron Length:

3575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTC

5'SS Class:

strong_major

3'SS Sequence:

AAACCTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTTCTCTTAAAC

Flanking Amino Acid:

FKKRPKTILKTGPEYGQGMN

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

81.4

30.7

Major BPS

77.8

0.69

78.2

31.8

Major PPT

0.29

58.9

41.8

Minor 5ss

43.3

-0.7

3.1

60.6

44.5

Minor BPS

74.1

0.74

1.3

81.08

32.4

Associated Gene:

Gene:

STAU2

Ensembl Gene ID:

ENSAPLG00000005175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025342

124503068 - 124651455

148388

ENSAPLT00000005398

124555287 - 124651455

96169

ENSAPLT00000044400

124503068 - 124655898

152831