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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124620553_124643335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124620553 - 124643335

Intron Length:

22783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTACT

5'SS Class:

major

3'SS Sequence:

GACTTCTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTACATTAATT

Flanking Amino Acid:

NYNFRGMYNQRYHCPVPKIF

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

78.3

35.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

79.2

0.66

0.9

72.2

37.6

Minor 5ss

40.8

-1

2.4

53.1

43.6

Minor BPS

73.9

0.83

1.6

90.3

33.2

Associated Gene:

Gene:

STAU2

Ensembl Gene ID:

ENSAPLG00000005175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044400

124503068 - 124655898

152831

ENSAPLT00000025342

124503068 - 124651455

148388

ENSAPLT00000005398

124555287 - 124651455

96169