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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124690529_124692755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124690529 - 124692755

Intron Length:

2227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TAAATTACAAAT

Flanking Amino Acid:

SSRYPFDSPQVMFTGDNIPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

87.2

27.3

Major BPS

69.5

0.48

73.5

28.6

Major PPT

91.7

0.94

0.5

92.2

18.3

Minor 5ss

38.7

-1.3

3.4

58.4

46.2

Minor BPS

42.4

-0.5

1.7

57.4

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005138

124689216 - 124700063

10848