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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124823010_124823562_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

124823010 - 124823562

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGATGTTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

GCTGCCTTACTA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

72.3

0.5

0.9

69.3

41.6

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

55.8

0.18

1.8

63.35

43.6

Associated Gene:

Gene:

JPH1

Ensembl Gene ID:

ENSAPLG00000004829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041249

124822657 - 124907232

84576

ENSAPLT00000019419

124822656 - 124907232

84577