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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12482883_12522552_F

Intron Information:

Intron Rank:

130313

Intron Class:

major

Intron Phase:

Intron Coordinates:

12482883 - 12522552

Intron Length:

39670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTGCC

5'SS Class:

major

3'SS Sequence:

TTCTTTCCATCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACAAGAT

U12 Branch Point Sequence:

TTCTTTCCATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

66.1

41.2

Major BPS

48.4

-0.1

1.1

37.8

Major PPT

82.1

0.72

0.8

82.4

Minor 5ss

39.6

-1.2

44.8

43.3

Minor BPS

44.2

-0.4

59.35

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033132

12482649 - 12523588

40940