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Intron Name: Anas_platyrhynchos_platyrhynchos_2_124832249_124832563_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

124832249 - 124832563

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTACAC

5'SS Class:

major

3'SS Sequence:

ATGAATCCAACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TATTATGTAAAA

Flanking Amino Acid:

PKESPHFYRKVLPQELREED

Intron Amino Acid Position:

591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

40.2

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

59.4

0.21

1.1

52.2

41.8

Minor 5ss

31.3

-2.1

3.3

42.3

44.5

Minor BPS

48.3

-0.1

2.2

66.79

39.3

Associated Gene:

Gene:

JPH1

Ensembl Gene ID:

ENSAPLG00000004829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019419

124822656 - 124907232

84577