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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12504008_12549131_F

Intron Information:

Intron Rank:

127495

Intron Class:

major

Intron Phase:

Intron Coordinates:

12504008 - 12549131

Intron Length:

45124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTGGAAGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CTTTCTCTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

72.3

0.55

73.3

28.9

Major PPT

62.8

0.29

1.1

54.5

43.9

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

72.1

0.77

1.7

88.42

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033254

12503945 - 12585731

81787

ENSAPLT00000024560

12503582 - 12549149

45568