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Intron Name: Anas_platyrhynchos_platyrhynchos_2_125220205_125240577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125220205 - 125240577

Intron Length:

20373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCAAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTCTTTTATTT

Flanking Amino Acid:

YPPASNMEYMTWDVELERSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

87.3

0.93

0.8

36.5

Major PPT

78.9

0.65

0.9

75.1

38.4

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

62.9

0.48

1.5

80.46

35.9

Associated Gene:

Gene:

CRISPLD1

Ensembl Gene ID:

ENSAPLG00000013624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014275

125219882 - 125259203

39322