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Intron Name: Anas_platyrhynchos_platyrhynchos_2_125242816_125243945_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125242816 - 125243945

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTAAAG

Flanking Amino Acid:

AVYLVCNYSPKGNWWGHAPY

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.7

0.71

83.1

31.3

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

66.5

0.38

1.7

73.73

38.3

Associated Gene:

Gene:

CRISPLD1

Ensembl Gene ID:

ENSAPLG00000013624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014275

125219882 - 125259203

39322