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Intron Name: Anas_platyrhynchos_platyrhynchos_2_125495010_125498675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125495010 - 125498675

Intron Length:

3666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATAG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

AAGTTAATAAAT

Flanking Amino Acid:

KCFRAGMKKEAVQNERDRIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

70.5

36.1

Major BPS

70.8

0.52

70.6

31.6

Major PPT

89.2

0.88

0.7

81.5

35.8

Minor 5ss

37.4

-1.4

47.2

48.2

Minor BPS

-0.2

1.9

63.13

40.2

Associated Gene:

Gene:

HNF4G

Ensembl Gene ID:

ENSAPLG00000011794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012298

125474218 - 125510428

36211