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Intron Name: Anas_platyrhynchos_platyrhynchos_2_126359686_126360365_F

Intron Information:

Intron Rank:

131618

Intron Class:

major

Intron Phase:

Intron Coordinates:

126359686 - 126360365

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATGTTCA

5'SS Class:

major

3'SS Sequence:

TTTCGTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

TGTACGGTGATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

72.4

32.9

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

81.1

0.7

0.8

73.8

36.9

Minor 5ss

-0.1

2.3

63.3

41.4

Minor BPS

42.7

-0.5

2.6

59.43

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037523

126358148 - 126362534

4387