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Intron Name: Anas_platyrhynchos_platyrhynchos_2_126723377_126725334_R

Intron Information:

Intron Rank:

129700

Intron Class:

major

Intron Phase:

Intron Coordinates:

126723377 - 126725334

Intron Length:

1958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GAAATTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTGATGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.1

0.41

1.1

63.2

46.5

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

47.4

-0.1

2.2

72.71

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030416

126705381 - 126725419

20039