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Intron Name: Anas_platyrhynchos_platyrhynchos_2_127104992_127117158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127104992 - 127117158

Intron Length:

12167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCTGTCAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

VAAGLQDVSVGEVTVQTGDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.3

61.5

44.7

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

35.1

-1.7

2.7

40.9

45.4

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

ZC2HC1A

Ensembl Gene ID:

ENSAPLG00000009028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031921

127104144 - 127137846

33703