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Intron Name: Anas_platyrhynchos_platyrhynchos_2_127117979_127118201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127117979 - 127118201

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGTTAC

5'SS Class:

major

3'SS Sequence:

TTTGACTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TCTTTTTTGACT

Flanking Amino Acid:

IPTVKPLKPRPEPPKKPSNW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

35.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

75.9

0.58

0.8

73.8

36.4

Minor 5ss

46.1

-0.4

2.5

52.3

Minor BPS

75.9

0.9

1.1

85.97

34.5

Associated Gene:

Gene:

ZC2HC1A

Ensembl Gene ID:

ENSAPLG00000009028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031921

127104144 - 127137846

33703

ENSAPLT00000009409

127103772 - 127137846

34075