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Intron Name: Anas_platyrhynchos_platyrhynchos_2_127118338_127120387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127118338 - 127120387

Intron Length:

2050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCATTATTAATG

Flanking Amino Acid:

PPPPPPSYDPDYIQCPYCQR

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

77.7

31.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

75.2

0.57

1.1

79.4

38.1

Minor 5ss

41.3

-1

2.5

47.2

43.7

Minor BPS

57.9

0.11

1.7

60.74

41.5

Associated Gene:

Gene:

ZC2HC1A

Ensembl Gene ID:

ENSAPLG00000009028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031921

127104144 - 127137846

33703

ENSAPLT00000009409

127103772 - 127137846

34075