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Intron Name: Anas_platyrhynchos_platyrhynchos_2_127122747_127136929_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127122747 - 127136929

Intron Length:

14183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TATTCTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

GTTTATATAACT

Flanking Amino Acid:

NSLGMVNPQAGGVTKARTTP

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

79.4

0.66

0.9

77.6

36.4

Minor 5ss

-1

2.7

45.9

42.3

Minor BPS

62.1

0.46

1.8

37.5

Associated Gene:

Gene:

ZC2HC1A

Ensembl Gene ID:

ENSAPLG00000009028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031921

127104144 - 127137846

33703

ENSAPLT00000009409

127103772 - 127137846

34075