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Intron Name: Anas_platyrhynchos_platyrhynchos_2_127137035_127137665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127137035 - 127137665

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTTTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATCT

Flanking Amino Acid:

RKTSNSDSYSRPDGKIGYDS

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

78.8

38.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

100

1.12

0.4

100

Minor 5ss

51.1

0.04

2.9

75.5

40.6

Minor BPS

68.6

0.66

1.5

83.95

37.1

Associated Gene:

Gene:

ZC2HC1A

Ensembl Gene ID:

ENSAPLG00000009028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009409

127103772 - 127137846

34075

ENSAPLT00000031921

127104144 - 127137846

33703