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Intron Name: Anas_platyrhynchos_platyrhynchos_2_127151135_127151922_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
127151135 - 127151922

Intron Length:
788

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAGTTT

5'SS Class:
strong_major

3'SS Sequence:
GCTCTCTTCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTCAG

U12 Branch Point Sequence:
GCTCTCTTCACA

Flanking Amino Acid:
SKVFFCNDTQEIESLQSMAC

Intron Amino Acid Position:
81

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.5
0.79
0.9
81.9
32.1

Major BPS
67.2
0.43
1.5
77.4
37.3

Major PPT
77.8
0.62
0.8
71.5
32.9

Minor 5ss
42
-0.9
3.5
64.1
47.4

Minor BPS
55.6
0.17
1.8
64.92
41.5

Associated Gene:

Gene:
IL7

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

127149504 - 127158974
9471