Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_127155812_127158964_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127155812 - 127158964

Intron Length:

3153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTAATCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GTGTACTTAACT

Flanking Amino Acid:

MSHAFFRSIFRVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.6

41.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

72.4

0.5

63.5

46.3

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

75.4

0.88

1.5

86.11

39.5

Associated Gene:

Gene:

IL7

Ensembl Gene ID:

ENSAPLG00000009200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009567

127149504 - 127158974

9471