Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_127269_128474_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

127269 - 128474

Intron Length:

1206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTATGGGGG

5'SS Class:

weak_major

3'SS Sequence:

TCTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAC

U12 Branch Point Sequence:

ACTCCCTGACCC

Flanking Amino Acid:

KDYRFNFRRLRLWSLSYEQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.1

45.1

43.1

Major BPS

62.5

0.31

1.2

54.8

42.1

Major PPT

89.4

0.89

0.6

84.8

22.8

Minor 5ss

-1.6

3.5

41.9

46.1

Minor BPS

0.04

1.8

63.28

41.9

Associated Gene:

Gene:

ASB10

Ensembl Gene ID:

ENSAPLG00000009608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024004

126057 - 132051

5995