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Intron Name: Anas_platyrhynchos_platyrhynchos_2_127948067_127952740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127948067 - 127952740

Intron Length:

4674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAG

U12 Branch Point Sequence:

TCCTTTTTTACA

Flanking Amino Acid:

GTEGASEPEKRHSSMSYKSR

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.8

27.8

Major BPS

52.9

0.07

1.6

51.7

43.9

Major PPT

90.9

0.92

0.6

86.5

24.5

Minor 5ss

37.7

-1.4

2.9

52.3

44.3

Minor BPS

58.1

0.25

1.6

65.81

41.1

Associated Gene:

Gene:

PAG1

Ensembl Gene ID:

ENSAPLG00000004448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004560

127946095 - 127983845

37751

ENSAPLT00000030283

127945676 - 128019211

73536