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Intron Name: Anas_platyrhynchos_platyrhynchos_2_128276292_128280011_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

128276292 - 128280011

Intron Length:

3720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

AAATGTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATTTTTAAAT

Flanking Amino Acid:

GPFDSLEESRAFCETLEETN

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.5

0.4

63.4

42.9

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

69.2

0.68

1.3

80.13

35.2

Associated Gene:

Gene:

SNX16

Ensembl Gene ID:

ENSAPLG00000005095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043346

128273438 - 128296015

22578

ENSAPLT00000031894

128272664 - 128292714

20051

ENSAPLT00000005270

128273665 - 128292714

19050