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Intron Name: Anas_platyrhynchos_platyrhynchos_2_128280082_128284897_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

128280082 - 128284897

Intron Length:

4816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTGTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTATTTTATCT

Flanking Amino Acid:

NLVAHKDIANCLAVREFLCL

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.4

0.46

1.1

70.9

38.8

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

59.5

0.38

1.6

75.61

41.6

Associated Gene:

Gene:

SNX16

Ensembl Gene ID:

ENSAPLG00000005095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031894

128272664 - 128292714

20051

ENSAPLT00000005270

128273665 - 128292714

19050

ENSAPLT00000043346

128273438 - 128296015

22578