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Intron Name: Anas_platyrhynchos_platyrhynchos_2_128288543_128292250_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

128288543 - 128292250

Intron Length:

3708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

CTTTTCCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATGT

Flanking Amino Acid:

EVMEERAKFTVYKILVKRSP

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.63

0.8

73.1

30.8

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

66.5

0.6

1.9

87.15

38.9

Associated Gene:

Gene:

SNX16

Ensembl Gene ID:

ENSAPLG00000005095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043346

128273438 - 128296015

22578

ENSAPLT00000031894

128272664 - 128292714

20051

ENSAPLT00000005270

128273665 - 128292714

19050