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Intron Name: Anas_platyrhynchos_platyrhynchos_2_128292715_128295820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

128292715 - 128295820

Intron Length:

3106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTAAG

5'SS Class:

major

3'SS Sequence:

ACCTTCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTTTCCCTGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

70.7

41.1

Major BPS

65.7

0.39

71.3

30.3

Major PPT

76.6

0.6

0.9

34.4

Minor 5ss

33.8

-1.9

2.9

41.6

Minor BPS

75.5

0.79

1.6

87.16

29.5

Associated Gene:

Gene:

SNX16

Ensembl Gene ID:

ENSAPLG00000005095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043346

128273438 - 128296015

22578