Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_128624152_128627069_R

Intron Information:

Intron Rank:

143485

Intron Class:

major

Intron Phase:

Intron Coordinates:

128624152 - 128627069

Intron Length:

2918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCATCA

5'SS Class:

major

3'SS Sequence:

TCTTTATGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

GTTTATTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.5

Major BPS

81.6

0.78

0.8

24.9

Major PPT

76.5

0.6

0.9

40.5

Minor 5ss

42.7

-0.8

3.1

57.7

46.4

Minor BPS

64.9

0.46

1.6

74.66

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019280

128522250 - 128627370

105121

ENSAPLT00000034420

128617723 - 128627370

9648