Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_128938474_128948022_F

Intron Information:

Intron Rank:

137297

Intron Class:

major

Intron Phase:

Intron Coordinates:

128938474 - 128948022

Intron Length:

9549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAACTAAA

5'SS Class:

major

3'SS Sequence:

CCTTTATATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTCCCTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

74.1

38.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

78.7

0.65

0.9

73.6

34.9

Minor 5ss

40.1

-1.1

2.6

42.5

44.5

Minor BPS

73.9

0.83

1.6

92.15

30.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034291

128937746 - 128957542

19797