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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129277900_129278178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

129277900 - 129278178

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGGATA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TATTTTCTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.3

78.7

37.2

Major BPS

0.65

1.1

77.4

37.3

Major PPT

88.1

0.86

0.6

81.6

30.5

Minor 5ss

31.3

-2.1

3.1

45.6

Minor BPS

49.7

0.06

1.9

72.85

38.7

Associated Gene:

Gene:

RALYL

Ensembl Gene ID:

ENSAPLG00000015574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021682

129277746 - 129301607

23862