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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129480036_129534764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129480036 - 129534764

Intron Length:

54729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TCTTTTGTATCT

Flanking Amino Acid:

DFDEDGSNELVLSPVF*

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.4

33.7

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

83.8

0.76

0.8

78.2

35.3

Minor 5ss

34.1

-1.8

3.3

45.4

43.9

Minor BPS

49.3

0.03

2.2

74.38

43.4

Associated Gene:

Gene:

RALYL

Ensembl Gene ID:

ENSAPLG00000015574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023966

129215406 - 129534977

319572

ENSAPLT00000044033

129098859 - 129534977

436119