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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129598195_129598525_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

129598195 - 129598525

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

CATTCTTGCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TATTTCCAAATA

Flanking Amino Acid:

SNATEESTYRALIQELDQEK

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

74.2

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

62.6

0.28

1.1

67.3

37.8

Minor 5ss

62.3

0.41

2.2

71.8

39.2

Minor BPS

51.5

0.04

1.9

68.65

37.9

Associated Gene:

Gene:

LRRCC1

Ensembl Gene ID:

ENSAPLG00000015947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016663

129592569 - 129611368

18800