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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129641321_129644954_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129641321 - 129644954

Intron Length:

3634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTCC

5'SS Class:

major

3'SS Sequence:

TTTGGGTTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAA

U12 Branch Point Sequence:

CTGCAGTGAAAC

Flanking Amino Acid:

VEFDDTVNKSVLTGGPLSGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.2

69.6

35.5

Major BPS

51.9

0.05

1.2

44.7

38.6

Major PPT

75.6

0.58

0.9

69.5

41.6

Minor 5ss

43.9

-0.7

2.3

54.4

42.7

Minor BPS

38.9

-0.8

2.2

47.05

41.6

Associated Gene:

Gene:

CA13

Ensembl Gene ID:

ENSAPLG00000016183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016897

129641095 - 129652276

11182