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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129702143_129703743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129702143 - 129703743

Intron Length:

1601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGACTG

5'SS Class:

major

3'SS Sequence:

TATTGATTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GTTTTATTGATT

Flanking Amino Acid:

VIDGVKYAAELHMVHWNPKH

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.4

45.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

77.5

0.62

0.9

74.6

39.9

Minor 5ss

34.2

-1.8

3.5

46.9

48.4

Minor BPS

63.3

0.5

1.6

80.48

35.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042433

129698248 - 129711083

12836