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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129705779_129708144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129705779 - 129708144

Intron Length:

2366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCAAAA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTGTTTTTAAG

Flanking Amino Acid:

LEEIDNIKTKGKEAPFQHFD

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.2

69.6

36.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

82.1

0.72

86.9

31.1

Minor 5ss

44.4

-0.6

2.7

57.4

46.9

Minor BPS

48.1

-0.2

1.9

59.36

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042433

129698248 - 129711083

12836