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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129792501_129793589_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129792501 - 129793589

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGACC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

CCGTGCCCACCG

Flanking Amino Acid:

RAPPQEHTLPRPAHWHEHFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

73.3

34.3

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

71.9

0.49

0.9

65.5

36.1

Minor 5ss

35.2

-1.7

3.1

44.8

36.8

Minor BPS

34.9

-1.2

2.2

35.38

45.8

Associated Gene:

Gene:

CA2

Ensembl Gene ID:

ENSAPLG00000003211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042724

129792344 - 129809954

17611

ENSAPLT00000017441

129792344 - 129809954

17611