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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129793788_129804331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129793788 - 129804331

Intron Length:

10544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GAGATGCTAACA

Flanking Amino Acid:

VEFDDSSDKSVLQGGALDGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

74.2

36.1

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

86.2

0.81

0.8

80.4

31.5

Minor 5ss

29.2

-2.4

3.1

45.5

Minor BPS

41.8

-0.6

2.2

50.48

40.4

Associated Gene:

Gene:

CA2

Ensembl Gene ID:

ENSAPLG00000003211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042724

129792344 - 129809954

17611

ENSAPLT00000017441

129792344 - 129809954

17611

ENSAPLT00000003310

129793067 - 129809954

16888