Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_129799_131099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129799 - 131099

Intron Length:

1301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCAGGGC

5'SS Class:

major

3'SS Sequence:

CTCCCTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTCAC

U12 Branch Point Sequence:

CTGGGTTCACCT

Flanking Amino Acid:

IRIWPGSLLKVLRYCHACPR

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.1

Major BPS

57.1

0.18

1.3

63.1

44.5

Major PPT

69.5

0.44

36.7

Minor 5ss

22.4

-3.2

3.5

32.1

42.7

Minor BPS

40.2

-0.6

2.1

54.76

47.6

Associated Gene:

Gene:

ASB10

Ensembl Gene ID:

ENSAPLG00000009608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024004

126057 - 132051

5995

ENSAPLT00000010007

123092 - 132051

8960