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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129804451_129805358_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129804451 - 129805358

Intron Length:

908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTCATAGTG

Flanking Amino Acid:

TVDGVKYDAELHIVHWNVKY

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

71.6

40.1

Major BPS

100

1.24

0.5

100

Major PPT

76.5

0.6

0.8

69.4

36.9

Minor 5ss

32.2

-2

3.4

46.9

48.4

Minor BPS

-0.1

1.9

62.34

39.9

Associated Gene:

Gene:

CA2

Ensembl Gene ID:

ENSAPLG00000003211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042724

129792344 - 129809954

17611

ENSAPLT00000017441

129792344 - 129809954

17611

ENSAPLT00000003310

129793067 - 129809954

16888