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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129807385_129809642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129807385 - 129809642

Intron Length:

2258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

CCTTTTTCCACA

Flanking Amino Acid:

KEPITVSPEQMCKLRGLCFN

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

83.9

0.76

0.7

79.2

26.4

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

46.9

-0.2

1.9

42.5

Associated Gene:

Gene:

CA2

Ensembl Gene ID:

ENSAPLG00000003211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042724

129792344 - 129809954

17611

ENSAPLT00000017441

129792344 - 129809954

17611

ENSAPLT00000003310

129793067 - 129809954

16888