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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12990358_13038101_R

Intron Information:

Intron Rank:

140695

Intron Class:

major

Intron Phase:

Intron Coordinates:

12990358 - 13038101

Intron Length:

47744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TCTGTTTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

27.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

77.2

0.61

74.3

40.5

Minor 5ss

36.8

-1.5

3.4

53.7

43.8

Minor BPS

-0.3

1.9

63.05

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018485

12990279 - 13039265

48987

ENSAPLT00000019408

12981687 - 13094174

112488