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Intron Name: Anas_platyrhynchos_platyrhynchos_2_129981571_129982111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129981571 - 129982111

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATTACCATAATA

Flanking Amino Acid:

TLEDAFFEHEVKLNVLAFNN

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

81.3

0.7

0.8

76.3

31.7

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

65.3

0.48

1.6

75.94

34.7

Associated Gene:

Gene:

ATP6V0D2

Ensembl Gene ID:

ENSAPLG00000003128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003201

129964897 - 129982526

17630