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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130067548_130067665_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130067548 - 130067665

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTATATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTATAT

U12 Branch Point Sequence:

AGATGCCTAACT

Flanking Amino Acid:

YPAHTEEDKQDHTQTPKKSS

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

66.7

0.41

1.1

63.2

42.8

Major PPT

78.6

0.64

0.9

69.6

40.1

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

52.3

0.15

2.1

73.27

42.8

Associated Gene:

Gene:

RMDN1

Ensembl Gene ID:

ENSAPLG00000000614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040847

130067096 - 130078918

11823