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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130073592_130074296_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

130073592 - 130074296

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCGTGCACTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

CTCCCGTGCACT

Flanking Amino Acid:

NAFVIKEHFQRAIELNPKDA

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

73.8

32.7

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

58.3

0.19

0.9

50.9

38.1

Minor 5ss

36.1

-1.6

3.2

46.7

48.6

Minor BPS

42.1

-0.5

2.5

61.75

47.8

Associated Gene:

Gene:

RMDN1

Ensembl Gene ID:

ENSAPLG00000000614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040847

130067096 - 130078918

11823

ENSAPLT00000036260

130066688 - 130078918

12231

ENSAPLT00000028989

130048932 - 130079114

30183

ENSAPLT00000000927

130065530 - 130079114

13585