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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130098046_130098641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130098046 - 130098641

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CCATCTTTGACT

Flanking Amino Acid:

SGIVSVKHCEIIIECTFLDY

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

86.5

0.82

0.7

85.4

Minor 5ss

32.8

-2

2.7

42.5

44.3

Minor BPS

69.4

0.69

1.2

75.22

42.1

Associated Gene:

Gene:

CPNE3

Ensembl Gene ID:

ENSAPLG00000015617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016308

130087049 - 130108012

20964