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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130100457_130100557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130100457 - 130100557

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTATTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

CTGTTCTGACCT

Flanking Amino Acid:

FGAQIPPSFQVSHEFPLNFN

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

30.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

70.3

0.46

1.1

65.3

44.7

Minor 5ss

29.8

-2.3

3.3

38.4

46.6

Minor BPS

53.9

0.2

1.8

71.85

45.3

Associated Gene:

Gene:

CPNE3

Ensembl Gene ID:

ENSAPLG00000015617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016308

130087049 - 130108012

20964