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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130100610_130101270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130100610 - 130101270

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTAGGTTGAAAC

Flanking Amino Acid:

NFNPSNPFCNGIQGIVDAYR

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

73.3

37.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.8

0.63

0.9

70.4

Minor 5ss

34.6

-1.7

2.8

39.6

39.8

Minor BPS

45.1

-0.3

57.08

41.4

Associated Gene:

Gene:

CPNE3

Ensembl Gene ID:

ENSAPLG00000015617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016308

130087049 - 130108012

20964