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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130123246_130124286_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130123246 - 130124286

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTCTACTTAATT

Flanking Amino Acid:

AIVNKVDLFKGCDTQMIYDM

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

1.1

88.2

21.8

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

77.4

0.62

73.6

40.4

Minor 5ss

28.4

-2.5

3.7

38.5

32.5

Minor BPS

77.2

0.93

1.4

88.84

36.2

Associated Gene:

Gene:

CNGB3

Ensembl Gene ID:

ENSAPLG00000015533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016188

130112710 - 130146814

34105