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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130124385_130124806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130124385 - 130124806

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATT

Flanking Amino Acid:

EYTWDSQGMLDESELLEQMP

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.8

0.74

0.9

76.5

Minor 5ss

36.2

-1.6

3.5

48.3

47.3

Minor BPS

77.9

0.95

1.1

86.64

33.8

Associated Gene:

Gene:

CNGB3

Ensembl Gene ID:

ENSAPLG00000015533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016188

130112710 - 130146814

34105