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Intron Name: Anas_platyrhynchos_platyrhynchos_2_13038208_13040323_R

Intron Information:

Intron Rank:

140717

Intron Class:

major

Intron Phase:

Intron Coordinates:

13038208 - 13040323

Intron Length:

2116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CATTTATTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTTTAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

83.2

0.75

0.8

76.7

36.1

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

65.1

0.55

1.6

81.14

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042669

13032646 - 13040326

7681