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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130619544_130637000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130619544 - 130637000

Intron Length:

17457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TGACCGTGAATA

Flanking Amino Acid:

NSDGNFVFFKGFTYFYKGKE

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

89.3

0.88

0.6

88.8

20.5

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

47.1

-0.2

2.1

59.77

39.7

Associated Gene:

Gene:

MMP16

Ensembl Gene ID:

ENSAPLG00000015440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040108

130619209 - 130799527

180319