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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130627623_130637000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130627623 - 130637000

Intron Length:

9378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

ATGTCTTTATAT

Flanking Amino Acid:

NSDGNFVFFKGNKFWVFKDT

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

77.1

0.61

72.2

42.7

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

59.7

0.38

1.7

75.41

41.4

Associated Gene:

Gene:

MMP16

Ensembl Gene ID:

ENSAPLG00000015440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018795

130627345 - 130799527

172183

ENSAPLT00000016086

130619209 - 130798617

179409